# DATASET SET (20<=LEN<310) NOVEMBER 2006 # * CHAIN WITH AT LEAST 1 BASE PAIR # - STRUCTURE WITHOUT BASE PAIR # # SCOR-RNA DATASET: RNA CHAIN WITH DEFINED # SCOR FUNCTION # # PDB CHAIN LENGTH SS SCOR_FUNCTION 17RA _ 21 * 1A1T B 20 * 1A51 _ 41 * 1A60 _ 44 * Turnip_yellow_mosaic_virus_tRNA-like_pseudoknot 1A9L _ 38 * 1A9N Q 24 * U2_snRNA 1AJU A 30 * 1ANR _ 29 * HIV_TAR_RNA 1AQO _ 29 * 1ASY R 75 * Synthetase_complexe_tRNA 1AUD B 30 * 1B23 R 67 * 1B36 A 38 * Hairpin_ribozyme 1BAU A 23 * Retrovirus_dimerization_initiation_site 1BGZ _ 23 * 1BIV A 28 * 1BJ2 A 21 * 1BR3 B 28 * 1BVJ A 23 * 1BYJ A 27 * 1C0A B 68 * Synthetase_complexe_tRNA 1C2X C 120 * 1C9S W 55 - 1CQ5 A 43 * 1D0U A 21 * 1D4R B 28 - 1D6K B 37 * 1DDY A 35 * 1DK1 B 57 * Central_domain,_complex_with_protein 1DZ5 C 22 - 1E4P A 24 * VSRibozymeSubstrateStemLoop 1E95 A 36 * 1EBQ _ 29 * HIV-1_Rev_response_element_Rev_binding_site 1EBR _ 30 * HIV-1_Rev_response_element_Rev_binding_site 1EC6 C 20 * 1EHT _ 33 * 1EI2 A 25 * 1EIY C 76 * Synthetase_complexe_tRNA 1EKZ B 30 * 1EOR A 22 * 1ETF A 34 * HIV-1_Rev_response_element_Rev_binding_site 1EXY A 33 * 1F1T A 38 * 1F6X A 27 * RNAsePRNAP4Stem 1F6Z A 27 * RNAsePRNAP4Stem 1F7U B 64 * Synthetase_complexe_tRNA 1F84 A 29 * InternalRibosomeEntrySite 1F8V R 25 * 1FFK 9 122 * 1FFY T 75 * Synthetase_complexe_tRNA 1FIR A 61 * 1FJE A 22 * 1FMN _ 35 * 1FOQ A 109 * 1FYO A 27 * 1G1X I 41 * Central_domain,_complex_with_protein 1G59 B 75 * Synthetase_complexe_tRNA 1G70 A 32 * 1GAX C 75 * Synthetase_complexe_tRNA 1GIX D 68 * 1GRZ A 247 * 1GTF W 44 - 1GTN W 44 - 1GTR B 74 * Synthetase_complexe_tRNA 1H3E B 80 * Synthetase_complexe_tRNA 1H4Q T 66 * Synthetase_complexe_tRNA 1HLX _ 20 * 1HMH A 34 * Hammerhead_ribozyme 1HVU C 30 * 1HWQ A 30 * VSRibozymeSubstrateStemLoop 1HYS E 23 - 1HYS F 22 - 1I6U C 37 * 1IKD _ 22 * Individual_stems_or_stem-loop_tRNA_(Ala)_acceptor_stem 1J1U B 74 * Synthetase_complexe_tRNA 1J2B C 77 * 1JBR D 31 * 23S_rRNA_Sarcin_/_ricin_loop 1JID B 28 * 1JO7 A 31 * InfluenzaAVirusC4Promoter 1JOX A 21 * 1JTJ A 23 * HIV-1_PSIRNA_STEM_LOOP_SL1 1JUR A 22 * 1K2G A 22 * 1K5I A 23 * 1K6G A 22 * RNAloop 1K6H A 22 * RNAloop 1K8W B 21 * 1K9W A 23 * Retrovirus_dimerization_initiation_site 1KAJ _ 32 * 1KH6 A 48 * InternalRibosomeEntrySite 1KKS A 24 * 1KOG I 37 * 1KP7 A 30 * InternalRibosomeEntrySite 1KPY A 27 * 1KXK A 70 * 1L1C C 29 * 1L2X A 27 * 1L8V A 157 * 1LDZ _ 30 * 1LVJ A 31 * HIV_TAR_RNA 1M5K A 21 - 1M5L A 38 * HIV-1_PSIRNA_STEM_LOOP_SL1 1M5O A 20 - 1M5O B 92 * Hairpin_ribozyme 1M82 A 25 * InfluenzaAVirusC4Promoter 1MFJ A 20 * 1MFK A 23 * 1MJI C 34 * 1MME B 25 * Hammerhead_ribozyme 1MMS C 58 * 1MNX A 42 * 1MSY A 27 * 23S_rRNA_Sarcin_/_ricin_loop 1MT4 A 24 * 1N66 A 22 * 1N8X A 36 * HIV-1_PSIRNA_STEM_LOOP_SL1 1NBK A 34 * 1NBS A 120 * 1NBS B 150 * 1NC0 A 24 * U6_snRNA 1NEM A 23 * 1NJM 5 24 * Individual_stems_or_stem-loop_tRNA_(Ala)_acceptor_stem 1NKW 9 118 * 1NLC A 23 - 1NTA A 22 * 1NYB B 24 * 1NZ1 A 23 * U6_snRNA 1OB2 B 63 * 1OOA C 29 * 1OSW A 22 * HIV-1_PSIRNA_STEM_LOOP_SL1 1OW9 A 23 * VSRibozymeSubstrateStemLoop 1P5M A 55 * InternalRibosomeEntrySite 1P5N A 34 * InternalRibosomeEntrySite 1P5O A 77 * InternalRibosomeEntrySite 1P6V B 45 * 1Q8N A 38 * 1Q93 A 27 * 28S_rRNA_Sarcin_/_ricin_loop 1Q96 A 27 * 28S_rRNA_Sarcin_/_ricin_loop 1QD3 A 29 * HIV_TAR_RNA 1QF6 B 69 * Synthetase_complexe_tRNA 1QLN T 22 - 1QWA A 21 * 1QWB A 26 * 1QZW B 45 * 1R7W A 34 * 1R7Z A 34 * 1R9T T 28 - 1RAW _ 36 * 1RFR A 30 * 1RHT _ 24 * 1RLG C 22 * 1RMN _ 49 * 1RNK _ 34 * 1RPU C 21 - 1RY1 M 27 - 1RY1 N 31 - 1RY1 O 24 - 1S03 A 47 * 1S2F A 23 * 1S76 T 21 * 1S9S A 101 * Retrovirus_dimerization_initiation_site 1SER T 64 * Synthetase_complexe_tRNA 1SJF B 74 * 1SZY A 21 * 1T28 A 34 * 1T4L A 32 * 1TJZ A 22 * 1TLR _ 23 * 1TN2 _ 76 * 1TOB _ 27 * 1TRA _ 75 * 1TXS A 38 * 1U0B A 74 * 1U2A _ 20 * U2_snRNA 1U63 B 49 * 1U6B B 195 * 1U6B C 22 - 1U8D A 67 * 1U9S A 155 * 1ULL A 35 * 1UN6 E 61 * 1VFG D 34 * 1WSU E 22 * 1WSU G 21 * 1WZ2 C 88 * 1XHP A 32 * 1XJR A 46 * 1XOK A 27 * 1XP7 A 23 * 1XSG A 27 * 1XSH A 27 * 1Y0Q A 229 * 1Y26 X 71 * 1Y27 X 67 * 1Y39 C 57 * 1YFG _ 64 * 1YG3 A 27 * 1YKV B 38 * 1YL4 1 66 * 1YLG A 31 * 1YMO A 47 * 1YNE A 31 * 1YRJ A 23 - 1YSV A 27 * 1Z2J A 45 * 1Z31 A 32 * 1Z43 A 101 * 1ZC5 A 41 * 1ZE2 C 21 * 1ZHO B 38 * 28SP A 28 * 2A2E A 304 * 2A43 A 26 * 2A64 A 298 * 2ADT A 43 * 2AHT A 27 * 2ANN B 23 * 2ANR B 24 * 2AP0 A 27 * 2AU4 A 41 * 2B63 R 27 * 2BTE B 78 * 2CKY A 77 * 2CSX C 75 * 2CZJ B 60 * 2D1A A 39 - 2D6F F 74 * 2DER C 74 * 2DR2 B 75 * 2DRB B 35 * 2ES5 A 23 * 2EUY A 34 * 2EZ6 C 28 * 2F4X A 24 * 2F88 A 34 * 2F8S C 22 - 2F8T C 26 - 2FEY A 43 * 2FK6 R 53 * 2FMT C 73 * 2FQN A 22 - 2FRL A 23 * 2G1W A 22 * 2GIO A 29 * 2GIP A 28 * 2GIS A 94 * 2GM0 A 35 - 2GOZ A 42 * 2GTT W 99 - 2GTT X 99 - 2GV3 A 22 * 2H0S A 21 - 2H0Z A 21 - 2H0Z B 123 * 2H2X A 21 * 2HEM A 24 * 2HGH B 55 * 2HGP 1 50 * 2HGP B 76 * 2HGR 1 27 - 2HNS A 22 * 2HOO A 83 * 2HVR C 24 - 2HVY E 61 * 2I1C z 67 - 2IXY A 27 * 2J00 V 77 * 2J28 8 74 * 2J37 A 128 * 2J37 Z 280 * 2TOB _ 20 * 2TPK A 36 * 387D A 26 * 3PHP A 23 * Turnip_yellow_mosaic_virus_tRNA-like_pseudoknot 430D A 29 * 28S_rRNA_Sarcin_/_ricin_loop 484D B 27 * 486D A 66 * 486D C 61 *